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      "description": "Cufflinks assembles transcripts, estimates their abundances, and tests for\ndifferential expression and regulation in RNA-Seq samples. It accepts aligned\nRNA-Seq reads and assembles the alignments into a parsimonious set of transcripts.\nCufflinks then estimates the relative abundances of these transcripts based on\nhow many reads support each one, taking into account biases in library\npreparation protocols.",
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